Basic Information
Locus ID:
Seu_jg3650
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Nuclear protein Es2
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 18180063 | 18193350 | + | Seu_jg3650 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.64 | 42,900.47 Da | 45.35 | 71.61 | -0.79 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF09751 | Nuclear protein Es2 | 10 | 212 | 6.3E-45 | IPR019148 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 184 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 199 | 229 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 163 | 255 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 230 | 246 | - | - |
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G07790.1 | DGCR14-related. | 0 |
| RefSeq | XP_021865073.1 | protein DGCR14 [Spinacia oleracea] | 0 |
| O44424 | Splicing factor ESS-2 homolog OS=Drosophila melanogaster OX=7227 GN=Es2 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9RTM8 | Protein DGCR14 OS=Spinacia oleracea OX=3562 GN=SOVF_035600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg19087 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_25545 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah038201 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg14643, Sbi_jg53932 |
| Amaranthaceae | Salicornia europaea | 2 | Seu_jg10477, Seu_jg3650 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00012726 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl78289, Sgl80785 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000017992, gene:ENSEOMG00000038964 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.9AG0002740, CQ.Regalona.r1.9BG0019730 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30017370 |
| Apiaceae | Apium graveolens | 1 | Ag2G00120 |
| Arecaceae | Cocos nucifera | 1 | COCNU_02G003500 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711995 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_06.1421.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G27576 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT3G07790.1 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10022183m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp3g06720.v2.2 |
| Brassicaceae | Brassica nigra | 2 | BniB01g056180.2N, BniB07g058880.2N |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g02200 |
| Dunaliellaceae | Dunaliella salina | 2 | Dusal.0137s00003.v1.0, Dusal.0137s00005.v1.0 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g15680 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG04.2217 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00031831 |
| Poaceae | Echinochloa crus-galli | 3 | AH06.1743, BH06.1640, CH06.1812 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_6AG0530550, gene-QOZ80_6BG0484330 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.7HG0710760.1.CDS1 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_033963 |
| Poaceae | Oryza coarctata | 2 | Oco11G009920, Oco12G009900 |
| Poaceae | Oryza sativa | 1 | LOC_Os06g30710.3 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_10G141700 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0400087 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr14G011710, Chr21G011640 |
| Poaceae | Thinopyrum elongatum | 1 | Tel7E01G579900 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC7AG047810, gene_TRIDC7BG039630 |
| Poaceae | Triticum aestivum | 3 | TraesCS7A02G342100.1, TraesCS7B02G240700.1.cds1 ... |
| Poaceae | Zea mays | 3 | Zm00001eb209420_P001, Zm00001eb209430_P002 ... |
| Poaceae | Zoysia japonica | 1 | nbis-gene-35437 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g32309 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG16.1105, evm.TU.LG20.1431 |
| Posidoniaceae | Posidonia oceanica | 2 | gene.Posoc05g22820, gene.Posoc09g07920 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_5_RagTag.1607, evm.TU.Scaffold_9_RagTag.1430 ... |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-12094 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-1244 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-10908, nbisL1-mrna-21426 |
| Rhizophoraceae | Kandelia candel | 2 | add.evm.TU.utg000003l.351, add.evm.TU.utg000006l.397 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00013303 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-20872, nbisL1-mrna-22356 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-15543, nbisL1-mrna-4646 |
| Salicaceae | Populus euphratica | 2 | populus_peu31085, populus_peu31107 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132616904 |
| Solanaceae | Solanum chilense | 1 | SOLCI001406700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026517 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.29805_chr10_+ |
| Tamaricaceae | Tamarix chinensis | 1 | TC03G0189 |
| Zosteraceae | Zostera marina | 1 | Zosma05g03760.v3.1 |