Basic Information
Locus ID:
Seu_jg3555
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 16078480 | 16098212 | + | Seu_jg3555 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.27 | 377,595.38 Da | 32.84 | 100.24 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 3141 | 3408 | 4.13647E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 1169 | 1206 | 3.6E-8 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 3139 | 3406 | 5.0E-47 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 32 | 71 | 3.1E-6 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 1354 | 1415 | 2.0E-6 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 2052 | 2321 | 3.4E-44 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 2973 | 3028 | 6.5E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 221 | 281 | 9.7E-9 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 2348 | 2385 | 1.4E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 100 | 159 | 4.9E-9 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1889 | 1946 | 6.9E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 879 | 1142 | 1.3E-45 | IPR000719 |
| Pfam | PF13855 | Leucine rich repeat | 2896 | 2955 | 1.5E-8 | IPR001611 |
| Pfam | PF13855 | Leucine rich repeat | 1789 | 1849 | 2.7E-7 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 2347 | 2600 | 1.45E-49 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 2817 | 3034 | 6.01E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 2525 | 2837 | 2.67E-57 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1420 | 1753 | 2.28E-58 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 78 | 404 | 1.69E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 1174 | 1520 | 1.53E-52 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 1660 | 1948 | 1.18E-59 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 341 | 619 | 3.74E-55 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 858 | 1144 | 1.08E-72 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 2033 | 2323 | 1.17E-70 | IPR011009 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3121 | 3408 | 4.32E-73 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 537 | 774 | 3.4E-52 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2130 | 2343 | 8.8E-49 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 341 | 453 | 1.1E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1520 | 1667 | 1.2E-46 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1166 | 1326 | 1.1E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 29 | 191 | 6.3E-37 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1668 | 1986 | 2.6E-93 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 454 | 797 | 1.1E-101 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2751 | 3067 | 1.4E-91 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2500 | 2598 | 2.8E-25 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 192 | 242 | 2.1E-8 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 3216 | 3421 | 3.4E-49 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 956 | 1158 | 9.8E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 1327 | 1519 | 2.1E-50 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 836 | 955 | 2.5E-29 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 2007 | 2129 | 2.2E-29 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 243 | 340 | 7.9E-24 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2599 | 2750 | 9.5E-48 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 3102 | 3215 | 1.1E-30 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 2347 | 2499 | 2.1E-39 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 1450 | 1474 | 0.61 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1788 | 1812 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2653 | 2677 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 390 | 414 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 606 | 629 | 260.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1836 | 1860 | 3.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 220 | 244 | 250.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2918 | 2942 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2532 | 2556 | 6.8 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2412 | 2436 | 82.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 630 | 653 | 71.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1305 | 1328 | 46.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 317 | 341 | 150.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2484 | 2508 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1619 | 1643 | 49.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 438 | 462 | 43.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1909 | 1932 | 57.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2701 | 2725 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 751 | 776 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1257 | 1281 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 269 | 293 | 18.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2629 | 2652 | 94.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1547 | 1571 | 29.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 37.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 727 | 750 | 63.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1836 | 1858 | 710.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 2484 | 2513 | 230.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1619 | 1645 | 380.0 | - |
| SMART | SM00369 | LRR_typ_2 | 2991 | 3014 | 42.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 1450 | 1473 | 260.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1571 | 1597 | 33.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 98 | 124 | 350.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1547 | 1570 | 280.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 2629 | 2655 | 64.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1402 | 1423 | 280.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 2918 | 2933 | 500.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 390 | 416 | 36.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 2991 | 3017 | 32.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 1909 | 1935 | 210.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1933 | 1957 | 35.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 654 | 678 | 22.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 2701 | 2730 | 520.0 | - |
| SMART | SM00369 | LRR_typ_2 | 172 | 195 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 1884 | 1908 | 160.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 342 | 366 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 2870 | 2894 | 23.0 | IPR003591 |
| SMART | SM00365 | LRR_sd22_2 | 727 | 753 | 730.0 | - |
| SMART | SM00365 | LRR_sd22_2 | 438 | 464 | 130.0 | - |
| SMART | SM00369 | LRR_typ_2 | 1402 | 1426 | 120.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 875 | 1152 | 39.43882 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 3135 | 3420 | 39.283344 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 2048 | 2331 | 38.435307 | IPR000719 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 2175 | 2187 | - | IPR008266 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 1001 | 1013 | - | IPR008266 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 3261 | 3273 | - | IPR008266 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 2054 | 2077 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 881 | 904 | - | IPR017441 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 3141 | 3164 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G08850.1 | Leucine-rich repeat receptor-like protein kinase family protein. | 0 |
| RefSeq | XP_010684678.2 | MDIS1-interacting receptor like kinase 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VZG8 | MDIS1-interacting receptor like kinase 2 OS=Arabidopsis thaliana OX=3702 GN=MIK2 PE=1 SV=3 | 0 | |
| TrEMBL | A0A7J6GVZ9 | Protein kinase domain-containing protein OS=Cannabis sativa OX=3483 GN=G4B88_024674 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology