Basic Information
Locus ID:
Seu_jg3469
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 14449194 | 14456622 | - | Seu_jg3469 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.81 | 97,579.09 Da | 51.42 | 74.32 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 506 | 673 | 1.7E-59 | IPR001752 |
| Pfam | PF16796 | Microtubule binding | 385 | 499 | 1.0E-34 | IPR031852 |
| Pfam | PF00307 | Calponin homology (CH) domain | 42 | 162 | 4.5E-14 | IPR001715 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 399 | 706 | 2.66E-99 | IPR027417 |
| SUPERFAMILY | SSF47576 | Calponin-homology domain, CH-domain | 42 | 177 | 1.48E-22 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 507 | 672 | 1.1E-66 | IPR036961 |
| Gene3D | G3DSA:1.10.418.10 | - | 29 | 183 | 3.4E-27 | IPR036872 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 342 | 506 | 3.8E-38 | IPR036961 |
| SMART | SM00033 | ch_5 | 42 | 158 | 3.1E-8 | IPR001715 |
| SMART | SM00129 | kinesin_4 | 397 | 682 | 1.3E-125 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 399 | 674 | 75.271149 | IPR001752 |
| ProSiteProfiles | PS50021 | Calponin homology (CH) domain profile. | 40 | 162 | 18.721365 | IPR001715 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 544 | 561 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 472 | 493 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 575 | 593 | 1.8E-39 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 624 | 645 | 1.8E-39 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 264 | 313 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 702 | 736 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 831 | 894 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 773 | 797 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 855 | 880 | - | - |
| Coils | Coil | Coil | 688 | 708 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G47500.1 | P-loop nucleoside triphosphate hydrolases superfamily protein with CH (Calponin Homology) domain. | 0 |
| RefSeq | XP_021722271.1 | kinesin-like protein KIN-14I [Chenopodium quinoa] | 0 |
| F4IL57 | Kinesin-like protein KIN-14I OS=Arabidopsis thaliana OX=3702 GN=KIN14I PE=2 SV=1 | 0 | |
| TrEMBL | A0A803M9D2 | Kinesin-4 OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology