Basic Information
Locus ID:
Seu_jg28708
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CPK30
Description:
calcium-dependent protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000020l | 5777634 | 5788112 | + | Seu_jg28708 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.53 | 62,305.68 Da | 39.64 | 84.61 | -0.43 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 66 | 324 | 1.74863E-137 | - |
| Pfam | PF00069 | Protein kinase domain | 67 | 325 | 6.5E-76 | IPR000719 |
| Pfam | PF13499 | EF-hand domain pair | 373 | 432 | 5.1E-10 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 443 | 510 | 2.3E-14 | IPR002048 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 64 | 326 | 1.35E-86 | IPR011009 |
| SUPERFAMILY | SSF47473 | EF-hand | 353 | 536 | 7.64E-44 | IPR011992 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 68 | 152 | 2.4E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 153 | 333 | 1.9E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 334 | 513 | 1.5E-52 | - |
| SMART | SM00054 | efh_1 | 372 | 400 | 3.4E-6 | IPR002048 |
| SMART | SM00054 | efh_1 | 444 | 472 | 0.0023 | IPR002048 |
| SMART | SM00054 | efh_1 | 484 | 512 | 3.2E-7 | IPR002048 |
| SMART | SM00220 | serkin_6 | 67 | 325 | 7.6E-98 | IPR000719 |
| SMART | SM00054 | efh_1 | 408 | 436 | 0.0041 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 480 | 515 | 14.122869 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 404 | 439 | 9.966455 | IPR002048 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 67 | 325 | 48.767258 | IPR000719 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 440 | 475 | 13.955498 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 368 | 403 | 15.489744 | IPR002048 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 73 | 96 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 187 | 199 | - | IPR008271 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 381 | 393 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 417 | 429 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 493 | 505 | - | IPR018247 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 453 | 465 | - | IPR018247 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 40 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 13 | 35 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G18890.1 | calcium-dependent protein kinase 1. encodes a calcium-dependent protein kinase whose gene expression is induced by dehydration and high salt. Kinase activity could not be detected in vitro. | 0 |
| RefSeq | XP_010678598.1 | calcium-dependent protein kinase 10 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9M9V8 | Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana OX=3702 GN=CPK10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M1C0 | Calcium-dependent protein kinase 30 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology