Basic Information
Locus ID:
Seu_jg28098
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
LYK4
Description:
lysM domain receptor-like kinase 4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000021l | 244122 | 246068 | - | Seu_jg28098 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 71,889.18 Da | 44.59 | 87.53 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01476 | LysM domain | 190 | 234 | 0.0075 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 368 | 629 | 3.1E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 337 | 630 | 4.85E-60 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 425 | 637 | 1.0E-47 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 330 | 424 | 9.0E-17 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 333 | 639 | 31.820593 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 121 | 168 | 9.08309 | IPR018392 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 188 | 233 | 10.666898 | IPR018392 |
| ProSitePatterns | PS00109 | Tyrosine protein kinases specific active-site signature. | 471 | 483 | - | IPR008266 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G23770.1 | protein kinase family protein / peptidoglycan-binding LysM domain-containing protein. | 0 |
| RefSeq | XP_048501773.1 | lysM domain receptor-like kinase 4 [Beta vulgaris subsp. vulgaris] | 0 |
| O64825 | LysM domain receptor-like kinase 4 OS=Arabidopsis thaliana OX=3702 GN=LYK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RWU9 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_025190 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology