Basic Information
Locus ID:
Seu_jg2803
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
1-phosphatidylinositol-3-phosphate 5-kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 5296188 | 5308492 | + | Seu_jg2803 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.57 | 192,485.48 Da | 43.21 | 71.79 | -0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03334 | Fab1_TCP | 350 | 622 | 3.43416E-133 | - |
| CDD | cd17300 | PIPKc_PIKfyve | 1417 | 1679 | 2.57293E-148 | IPR044769 |
| Pfam | PF01363 | FYVE zinc finger | 33 | 102 | 1.5E-15 | IPR000306 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1621 | 1677 | 2.3E-7 | IPR002498 |
| Pfam | PF01504 | Phosphatidylinositol-4-phosphate 5-Kinase | 1455 | 1620 | 1.4E-33 | IPR002498 |
| Pfam | PF00118 | TCP-1/cpn60 chaperonin family | 355 | 611 | 3.9E-31 | IPR002423 |
| SUPERFAMILY | SSF56104 | SAICAR synthase-like | 1406 | 1679 | 9.15E-81 | - |
| SUPERFAMILY | SSF52029 | GroEL apical domain-like | 416 | 588 | 2.2E-40 | IPR027409 |
| SUPERFAMILY | SSF57903 | FYVE/PHD zinc finger | 31 | 104 | 3.98E-18 | IPR011011 |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 22 | 106 | 1.5E-19 | IPR013083 |
| Gene3D | G3DSA:3.50.7.10 | GroEL | 415 | 588 | 5.3E-52 | IPR027409 |
| Gene3D | G3DSA:3.30.810.10 | - | 1538 | 1680 | 3.0E-42 | - |
| Gene3D | G3DSA:3.30.800.10 | Phosphatidylinositol Phosphate Kinase II Beta | 1383 | 1536 | 8.7E-37 | IPR027484 |
| SMART | SM00064 | fyve_4 | 28 | 103 | 4.3E-17 | IPR000306 |
| SMART | SM00330 | PIPK_2 | 1386 | 1680 | 1.9E-124 | IPR002498 |
| ProSiteProfiles | PS51455 | Phosphatidylinositol phosphate kinase (PIPK) domain profile. | 1353 | 1679 | 57.658436 | IPR002498 |
| ProSiteProfiles | PS50178 | Zinc finger FYVE/FYVE-related type profile. | 36 | 102 | 12.901085 | IPR017455 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1157 | 1177 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1689 | 1717 | - | - |
| Coils | Coil | Coil | 1070 | 1094 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G14270.1 | phosphatidylinositol-4-phosphate 5-kinase family protein. Encodes a protein that is predicted to act as a 1-phosphatidylinositol-3-phosphate (PtdIns3P) 5-kinase based on its homology to Fab1 from yeast. It contains an FYVE domain required for binding to PtdIns3P-containing membranes in yeast, as well as a Cpn60_TCP1 homology domain plus a kinase domain. fab1a/fab1b pollen grains not viable and have defective vacuolar organization. | 0 |
| RefSeq | XP_010685217.2 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LUM0 | 1-phosphatidylinositol-3-phosphate 5-kinase FAB1B OS=Arabidopsis thaliana OX=3702 GN=FAB1B PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9S494 | 1-phosphatidylinositol-3-phosphate 5-kinase OS=Spinacia oleracea OX=3562 GN=SOVF_001970 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology