Basic Information
Locus ID:
Seu_jg27772
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
transposon protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 16277123 | 16277577 | + | Seu_jg27772 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.24 | 12,307.54 Da | 40.14 | 81.45 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| MobiDBLite | mobidb-lite | consensus disorder prediction | 80 | 110 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_048501364.1 | uncharacterized protein LOC125497733 [Beta vulgaris subsp. vulgaris] | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg4807, Sbi_jg48468 |
| Amaranthaceae | Salicornia europaea | 4 | Seu_jg24673, Seu_jg27772, Seu_jg3965, Seu_jg4296 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00024131 |