Basic Information
Locus ID:
Seu_jg27508
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 10856464 | 10860304 | + | Seu_jg27508 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.52 | 98,973.63 Da | 38.89 | 86.91 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 573 | 846 | 5.1244E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 23 | 56 | 3.9E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 570 | 839 | 1.5E-46 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 314 | 352 | 0.39 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 374 | 415 | 2.9E-8 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 426 | 1.87E-51 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 546 | 843 | 5.8E-78 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 531 | 644 | 1.1E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 12 | 313 | 4.7E-75 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 645 | 868 | 9.4E-57 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 314 | 440 | 1.2E-30 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 179 | 202 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 378 | 401 | 14.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 105 | 128 | 0.026 | IPR003591 |
| SMART | SM00220 | serkin_6 | 567 | 847 | 1.1E-40 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 567 | 847 | 41.149033 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 692 | 704 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 573 | 595 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 448 | 463 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 463 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G23750.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021858158.1 | receptor-like kinase TMK4 [Spinacia oleracea] | 0 |
| Q9LK43 | Receptor-like kinase TMK4 OS=Arabidopsis thaliana OX=3702 GN=TMK4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R5X0 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_103090 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology