Basic Information
Locus ID:
Seu_jg27102
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000010l | 3575352 | 3591498 | + | Seu_jg27102 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 113,469.32 Da | 37.30 | 96.92 | 0.00 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 645 | 912 | 5.72207E-93 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 642 | 852 | 7.7E-46 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 625 | 923 | 1.89E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 308 | 7.14E-47 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 293 | 436 | 3.4E-11 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 715 | 924 | 7.8E-53 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 194 | 406 | 4.2E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 36 | 193 | 5.2E-38 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 611 | 714 | 8.5E-36 | - |
| SMART | SM00220 | serkin_6 | 639 | 912 | 3.0E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 639 | 912 | 38.576645 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 759 | 771 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 645 | 667 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021720977.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Chenopodium quinoa] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803MMK0 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology