halophFGD

Basic Information

Locus ID: Seu_jg2701

Species & Taxonomic ID: Salicornia europaea & 206448

Genome Assembly:

Description: Fasciclin-like arabinogalactan protein

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000011l	3941599	3942330	+	Seu_jg2701

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.79	25,629.53 Da	28.80	91.85	0.00

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF02469	Fasciclin domain	45	179	1.1E-20	IPR000782
SUPERFAMILY	SSF82153	FAS1 domain	18	179	5.36E-28	IPR036378
Gene3D	G3DSA:2.30.180.10	FAS1 domain	13	179	4.9E-20	IPR036378
SMART	SM00554	fasc_3	74	180	3.9E-23	IPR000782
ProSiteProfiles	PS50213	FAS1/BIgH3 domain profile.	33	177	20.688398	IPR000782
MobiDBLite	mobidb-lite	consensus disorder prediction	188	216	-	-

Best hit

Source	Best Hit ID	Description
TAIR	AT5G03170.1	FASCICLIN-like arabinogalactan-protein 11.
RefSeq	XP_021857978.1	fasciclin-like arabinogalactan protein 11 [Spinacia oleracea]
Swiss-Prot	Q8LEJ6	Fasciclin-like arabinogalactan protein 11 OS=Arabidopsis thaliana OX=3702 GN=FLA11 PE=2 SV=2
TrEMBL	A0A0K9QFL5	FAS1 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_184700 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	4	jg14948, jg19344, jg32047, jg35869
Aizoaceae	Mesembryanthemum crystallinum	2	gene_14239, gene_21090
Amaranthaceae	Atriplex hortensis	4	Ah011996, Ah030306, Ah030308, Ah033626
Amaranthaceae	Beta vulgaris	2	BVRB_7g162300, BVRB_9g209410
Amaranthaceae	Salicornia bigelovii	4	Sbi_jg11730, Sbi_jg2069, Sbi_jg34447, Sbi_jg46682
Amaranthaceae	Salicornia europaea	2	Seu_jg20971, Seu_jg2701
Amaranthaceae	Suaeda aralocaspica	2	GOSA_00005795, GOSA_00025721
Amaranthaceae	Suaeda glauca	6	Sgl71205, Sgl74775, Sgl79738, Sgl79747, Sgl82199, Sgl82201
Amaranthaceae	Chenopodium album	6	gene:ENSEOMG00000007483, gene:ENSEOMG00000018056 ... gene:ENSEOMG00000036547, gene:ENSEOMG00000037593, gene:ENSEOMG00000040429, gene:ENSEOMG00000051227
Amaranthaceae	Chenopodium quinoa	4	CQ.Regalona.r1.7AG0017420, CQ.Regalona.r1.7BG0018140 ... CQ.Regalona.r1.9AG0009280, CQ.Regalona.r1.9BG0014010
Anacardiaceae	Pistacia vera	2	pistato.v30058850, pistato.v30272380
Apiaceae	Apium graveolens	2	Ag2G00949, Ag3G00314
Arecaceae	Cocos nucifera	4	COCNU_04G014170, COCNU_06G006240, COCNU_14G004070 ... scaffold008698G000050
Arecaceae	Phoenix dactylifera	4	gene-LOC103702460, gene-LOC103706676, gene-LOC103709660 ... gene-LOC103713183
Asteraceae	Flaveria trinervia	4	Ftri11G25562, Ftri17G05640, Ftri2G21639, Ftri7G10369
Brassicaceae	Arabidopsis thaliana	5	AT1G03870.1, AT2G20520.1, AT5G03170.1, AT5G44130.1 ... AT5G60490.1
Brassicaceae	Eutrema salsugineum	5	Thhalv10002226m.g.v1.0, Thhalv10003262m.g.v1.0 ... Thhalv10008582m.g.v1.0, Thhalv10014491m.g.v1.0, Thhalv10015384m.g.v1.0
Brassicaceae	Schrenkiella parvula	5	Sp1g02730.v2.2, Sp2g08970.v2.2, Sp3g33750.v2.2 ... Sp6g22070.v2.2, Sp6g39550.v2.2
Brassicaceae	Brassica nigra	5	BniB02g061450.2N, BniB04g017210.2N, BniB05g030800.2N ... BniB08g000980.2N, BniB08g011760.2N
Casuarinaceae	Casuarina equisetifolia	9	Ceq02G2752, Ceq08G1311, Ceq08G1729, Ceq08G1730, Ceq08G1731 ... Ceq08G1732, Ceq08G1733, Ceq08G1734, Ceq08G1735
Casuarinaceae	Casuarina glauca	10	Cgl02G2845, Cgl02G2848, Cgl02G2857, Cgl08G1338, Cgl08G1769 ... Cgl08G1770, Cgl08G1771, Cgl08G1772, Cgl08G1773, Cgl08G1774
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno05g15530, gene.Cymno06g03790, gene.Cymno15g07010 ... gene.Cymno16g04300
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g24030, gene.Thate06g02230
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-11697, nbisL1-mrna-5538, nbisL1-mrna-8447
Nitrariaceae	Nitraria sibirica	4	evm.TU.LG01.1415, evm.TU.LG04.1763, evm.TU.LG09.934 ... evm.TU.LG09.936
Plantaginaceae	Plantago ovata	3	Pov_00004593, Pov_00006343, Pov_00014661
Poaceae	Echinochloa crus-galli	14	AH02.2685, AH02.570, AH05.1084, AH05.1402, AH07.1538 ... BH02.2764, BH02.575, BH05.1131, BH05.1571, BH07.1494, CH02.3771, CH02.650, CH05.1280, CH05.1771
Poaceae	Eleusine coracana subsp. coracana	10	gene-QOZ80_1AG0010590, gene-QOZ80_1AG0027960 ... gene-QOZ80_1BG0059090, gene-QOZ80_1BG0078140, gene-QOZ80_2AG0110780, gene-QOZ80_2BG0164270, gene-QOZ80_5AG0363230, gene-QOZ80_5AG0403710, gene-QOZ80_5BG0411320, gene-QOZ80_5BG0452100
Poaceae	Hordeum vulgare	4	HORVU.MOREX.r3.1HG0025530.1.CDS1 ... HORVU.MOREX.r3.1HG0087810.1.CDS1, HORVU.MOREX.r3.3HG0235910.1.CDS1, HORVU.MOREX.r3.3HG0278710.1.CDS1
Poaceae	Lolium multiflorum	5	gene-QYE76_009905, gene-QYE76_015525, gene-QYE76_049821 ... gene-QYE76_050096, gene-QYE76_054477
Poaceae	Oryza coarctata	10	Oco01G002350, Oco01G016790, Oco02G002400, Oco02G016980 ... Oco03G008560, Oco04G008960, Oco04G008970, Oco09G003040, Oco09G016780, Oco10G003010
Poaceae	Oryza sativa	6	LOC_Os01g06580.1, LOC_Os01g47780.1, LOC_Os02g20540.1 ... LOC_Os02g20560.1, LOC_Os05g07060.1, LOC_Os05g48890.1
Poaceae	Paspalum vaginatum	5	gene-BS78_03G056800, gene-BS78_03G224800, gene-BS78_K198700 ... gene-BS78_09G063400, gene-BS78_09G234900
Poaceae	Puccinellia tenuiflora	2	Pt_Chr0204419, Pt_Chr0506054
Poaceae	Sporobolus alterniflorus	12	Chr02G013250, Chr02G023070, Chr03G004610, Chr03G013120 ... Chr05G014030, Chr05G020500, Chr08G000470, Chr08G013340, Chr09G001110, Chr18G000430, Chr22G001310, Chr22G014540
Poaceae	Thinopyrum elongatum	4	Tel1E01G195000, Tel1E01G649600, Tel3E01G179800 ... Tel3E01G413200
Poaceae	Triticum dicoccoides	7	gene_TRIDC1AG015290, gene_TRIDC1AG058370 ... gene_TRIDC1BG067270, gene_TRIDC3AG012590, gene_TRIDC3AG036960, gene_TRIDC3BG016920, gene_TRIDC3BG040920
Poaceae	Triticum aestivum	12	TraesCS1A02G107500.1.cds1, TraesCS1A02G396700.1.cds1 ... TraesCS1B02G129500.1.cds1, TraesCS1B02G424900.1.cds1, TraesCS1D02G111600.1.cds1, TraesCS1D02G404600.1.cds1, TraesCS3A02G103100.1.cds1, TraesCS3A02G246600.1.cds1, TraesCS3B02G120700.1.cds1, TraesCS3B02G272700.1.cds1, TraesCS3D02G105500.1.cds1, TraesCS3D02G244900.1.cds1
Poaceae	Zea mays	4	Zm00001eb157310_P002, Zm00001eb203300_P001 ... Zm00001eb343680_P001, Zm00001eb353910_P001
Poaceae	Zoysia japonica	5	nbis-gene-13069, nbis-gene-18125, nbis-gene-45238 ... nbis-gene-51705, nbis-gene-6901
Poaceae	Zoysia macrostachya	6	Zma_g12635, Zma_g27377, Zma_g27754, Zma_g7637, Zma_g8400 ... Zma_g9996
Portulacaceae	Portulaca oleracea	5	evm.TU.LG06.1100, evm.TU.LG11.411, evm.TU.LG13.268 ... evm.TU.LG18.720, evm.TU.LG26.308
Posidoniaceae	Posidonia oceanica	5	gene.Posoc01g36430, gene.Posoc03g21140, gene.Posoc03g21150 ... gene.Posoc07g14060, gene.Posoc09g04320
Rhizophoraceae	Bruguiera sexangula	6	evm.TU.Scaffold_12_RagTag.348, evm.TU.Scaffold_12_RagTag.350 ... evm.TU.Scaffold_13_RagTag.719, evm.TU.Scaffold_13_RagTag.721, evm.TU.Scaffold_2_RagTag.863, evm.TU.Scaffold_5_RagTag.1310
Rhizophoraceae	Carallia pectinifolia	7	nbisL1-mrna-11810, nbisL1-mrna-24386, nbisL1-mrna-24391 ... nbisL1-mrna-24412, nbisL1-mrna-24416, nbisL1-mrna-30328, nbisL1-mrna-4339
Rhizophoraceae	Ceriops tagal	5	nbisL1-mrna-18801, nbisL1-mrna-19749, nbisL1-mrna-20811 ... nbisL1-mrna-20812, nbisL1-mrna-5398
Rhizophoraceae	Ceriops zippeliana	4	nbisL1-mrna-16101, nbisL1-mrna-19623, nbisL1-mrna-19624 ... nbisL1-mrna-9977
Rhizophoraceae	Kandelia candel	6	add.evm.TU.utg000009l.330, add.evm.TU.utg000015l.156 ... add.evm.TU.utg000015l.158, add.evm.TU.utg000027l.153, add.evm.TU.utg000027l.156, evm.TU.utg000027l.361
Rhizophoraceae	Kandelia obovata	4	Maker00004829, Maker00015298, Maker00018165, Maker00018217
Rhizophoraceae	Rhizophora apiculata	7	nbisL1-mrna-18446, nbisL1-mrna-18448, nbisL1-mrna-18987 ... nbisL1-mrna-18988, nbisL1-mrna-18989, nbisL1-mrna-20797, nbisL1-mrna-21856
Rhizophoraceae	Rhizophora mangle	6	nbisL1-mrna-11844, nbisL1-mrna-11845, nbisL1-mrna-11846 ... nbisL1-mrna-15080, nbisL1-mrna-15081, nbisL1-mrna-5871
Salicaceae	Populus euphratica	19	populus_peu08375, populus_peu11705, populus_peu16730 ... populus_peu16960, populus_peu16962, populus_peu16963, populus_peu18605, populus_peu18606, populus_peu18791, populus_peu18886, populus_peu25742, populus_peu25763, populus_peu29134, populus_peu29151, populus_peu29472, populus_peu30512, populus_peu35485, populus_peu37093, populus_peu37179
Solanaceae	Lycium barbarum	5	gene-LOC132600436, gene-LOC132618420, gene-LOC132626296 ... gene-LOC132630070, gene-LOC132630073
Solanaceae	Solanum chilense	5	SOLCI000535300, SOLCI001871500, SOLCI002614900 ... SOLCI002952900, SOLCI003375400
Solanaceae	Solanum pennellii	5	gene-LOC107003402, gene-LOC107021511, gene-LOC107026533 ... gene-LOC107029688, gene-LOC107030659
Tamaricaceae	Reaumuria soongarica	3	STRG.21441_chr09_-, gene_4533, gene_7570
Tamaricaceae	Tamarix chinensis	3	TC02G1870, TC03G1492, TC07G0682
Zosteraceae	Zostera marina	4	Zosma01g02150.v3.1, Zosma03g13920.v3.1, Zosma05g25570.v3.1 ... Zosma06g12550.v3.1