Basic Information
Locus ID:
Seu_jg26614
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000015l | 8580628 | 8585007 | - | Seu_jg26614 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.22 | 114,854.13 Da | 36.26 | 97.58 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 287 | 346 | 6.5E-10 | IPR001611 |
| Pfam | PF00560 | Leucine Rich Repeat | 263 | 285 | 0.11 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 729 | 998 | 1.4E-48 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 76 | 309 | 1.73E-49 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 729 | 1001 | 8.9E-73 | IPR011009 |
| SUPERFAMILY | SSF52047 | RNI-like | 278 | 616 | 3.45E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 255 | 353 | 7.4E-31 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 39 | 164 | 1.2E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 165 | 254 | 2.9E-24 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 708 | 804 | 2.1E-20 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 354 | 648 | 5.8E-75 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 805 | 1024 | 1.9E-59 | - |
| SMART | SM00369 | LRR_typ_2 | 453 | 477 | 170.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 141 | 165 | 20.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 572 | 595 | 78.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 478 | 501 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 309 | 332 | 19.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 237 | 261 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 726 | 1005 | 1.7E-30 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 285 | 308 | 28.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 357 | 381 | 85.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 382 | 405 | 170.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 726 | 1013 | 38.633183 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 732 | 755 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 852 | 864 | - | IPR008271 |
| PRINTS | PR00019 | Leucine-rich repeat signature | 312 | 325 | 8.0E-5 | - |
| PRINTS | PR00019 | Leucine-rich repeat signature | 572 | 585 | 8.0E-5 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1002 | 1043 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G61480.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021842183.1 | leucine-rich repeat receptor-like protein kinase TDR [Spinacia oleracea] | 0 |
| Q9FII5 | Leucine-rich repeat receptor-like protein kinase TDR OS=Arabidopsis thaliana OX=3702 GN=TDR PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RE89 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_076450 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology