Basic Information
Locus ID:
Seu_jg2658
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 3507385 | 3525590 | + | Seu_jg2658 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.19 | 130,230.05 Da | 41.65 | 90.47 | -0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04301 | NAT_SF | 154 | 214 | 1.43711E-8 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 285 | 323 | 6.7E-9 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 406 | 465 | 1.8E-7 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 915 | 1115 | 4.3E-30 | IPR000719 |
| Pfam | PF00583 | Acetyltransferase (GNAT) family | 111 | 229 | 1.0E-12 | IPR000182 |
| SUPERFAMILY | SSF55729 | Acyl-CoA N-acyltransferases (Nat) | 111 | 235 | 4.18E-19 | IPR016181 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 860 | 1145 | 1.91E-62 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 296 | 644 | 9.41E-54 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 546 | 639 | 6.4E-10 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 440 | 545 | 6.7E-27 | IPR032675 |
| Gene3D | G3DSA:3.40.630.30 | - | 107 | 242 | 3.3E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 925 | 1145 | 5.9E-58 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 846 | 924 | 3.5E-16 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 284 | 439 | 1.9E-38 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 428 | 451 | 270.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 571 | 595 | 5.1 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 452 | 475 | 120.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 380 | 404 | 76.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 476 | 500 | 57.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 875 | 1124 | 5.0E-19 | IPR000719 |
| ProSiteProfiles | PS51186 | Gcn5-related N-acetyltransferase (GNAT) domain profile. | 102 | 247 | 14.800444 | IPR000182 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 784 | 1121 | 28.682846 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 881 | 903 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 968 | 980 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1126 | 1145 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1125 | 1145 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9R8K6 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_094150 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology