Basic Information
Locus ID:
Seu_jg2657
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000011l | 3456321 | 3471095 | - | Seu_jg2657 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.97 | 105,122.76 Da | 35.73 | 95.19 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 624 | 890 | 4.81806E-86 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 27 | 65 | 1.6E-7 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 620 | 887 | 2.3E-45 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 603 | 913 | 1.24E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 388 | 6.97E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 288 | 3.1E-64 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 588 | 693 | 2.4E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 694 | 909 | 5.0E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 289 | 381 | 2.2E-11 | IPR032675 |
| SMART | SM00369 | LRR_typ_2 | 218 | 242 | 280.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 243 | 266 | 200.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 122 | 146 | 73.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 313 | 337 | 17.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 194 | 217 | 120.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 618 | 894 | 1.0E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 618 | 891 | 37.926483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 624 | 646 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 738 | 750 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G01950.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021767435.1 | probable LRR receptor-like serine/threonine-protein kinase At1g06840 isoform X2 [Chenopodium quinoa] | 0 |
| C0LGD7 | Probable LRR receptor-like serine/threonine-protein kinase At1g06840 OS=Arabidopsis thaliana OX=3702 GN=At1g06840 PE=1 SV=2 | 0 | |
| TrEMBL | A0A803L3K8 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology