HalophFGD

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Basic Information
Locus ID: Seu_jg25612
Species & Taxonomic ID: Salicornia europaea & 206448
Genome Assembly:
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000001l 28010633 28015233 - Seu_jg25612
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
7.54 62,000.55 Da 49.44 84.96 -0.23
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 62 99 2.0E-4 IPR001810
SUPERFAMILY SSF81383 F-box domain 57 97 7.06E-7 IPR036047
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021867407.1 uncharacterized protein LOC110806079 [Spinacia oleracea] 0
TrEMBL A0A0K9QMV3 F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_161500 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 2 Sbi_jg31290, Sbi_jg57981
Amaranthaceae Salicornia europaea 1 Seu_jg25612
Amaranthaceae Suaeda glauca 2 Sgl04353, Sgl09422
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.