Basic Information
Locus ID:
Seu_jg25235
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Domain of unknown function (DUF3444)
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000001l | 21295964 | 21298924 | + | Seu_jg25235 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 80,998.30 Da | 32.81 | 62.98 | -0.72 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 66 | 119 | 1.56048E-20 | IPR001623 |
| Pfam | PF11926 | Domain of unknown function (DUF3444) | 443 | 650 | 6.5E-78 | IPR024593 |
| Pfam | PF00226 | DnaJ domain | 66 | 127 | 2.2E-20 | IPR001623 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 42 | 126 | 2.88E-22 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 172 | 1.6E-22 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 65 | 122 | 3.2E-22 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 66 | 130 | 17.573126 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 107 | 126 | - | IPR018253 |
| PRINTS | PR00625 | DnaJ domain signature | 86 | 101 | 1.8E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 102 | 122 | 1.8E-12 | IPR001623 |
| PRINTS | PR00625 | DnaJ domain signature | 68 | 86 | 1.8E-12 | IPR001623 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 136 | 155 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 414 | 444 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 279 | 321 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G53150.2 | - | 0 |
| RefSeq | XP_010695370.1 | uncharacterized protein LOC104908022 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8WW22 | DnaJ homolog subfamily A member 4 OS=Homo sapiens OX=9606 GN=DNAJA4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RFM3 | J domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_072000 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology