Basic Information
Locus ID:
Seu_jg23593
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
F-box family protein-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 5406019 | 5407584 | + | Seu_jg23593 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.07 | 59,013.21 Da | 44.23 | 83.20 | -0.29 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 74 | 112 | 2.8E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 75 | 104 | 8.63E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 73 | 105 | 5.7E-6 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 39 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 23 | 39 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 4 | Ah025728, Ah025731, Ah025734, Ah025748 |
| Amaranthaceae | Salicornia bigelovii | 5 | Sbi_jg59328, Sbi_jg59330, Sbi_jg59331, Sbi_jg59332 ... |
| Amaranthaceae | Salicornia europaea | 5 | Seu_jg13336, Seu_jg23585, Seu_jg23587, Seu_jg23591 ... |
| Amaranthaceae | Suaeda glauca | 1 | Sgl66969 |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.5BG0019180, CQ.Regalona.r1.6AG0014140 ... |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103709460 |