Basic Information
Locus ID:
Seu_jg23417
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
F-box Kelch-repeat protein
Maps and Mapping Data
| Chromosome/Scaffold | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000007l | 3391325 | 3392359 | + | Seu_jg23417 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.92 | 37,970.20 Da | 37.62 | 73.81 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01344 | Kelch motif | 113 | 154 | 2.2E-8 | IPR006652 |
| Pfam | PF01344 | Kelch motif | 162 | 202 | 2.2E-7 | IPR006652 |
| SUPERFAMILY | SSF117281 | Kelch motif | 84 | 301 | 3.79E-36 | IPR015915 |
| Gene3D | G3DSA:2.120.10.80 | - | 42 | 306 | 4.4E-35 | IPR015915 |
| SMART | SM00256 | fbox_2 | 11 | 51 | 4.7E-4 | IPR001810 |
| SMART | SM00612 | kelc_smart | 168 | 215 | 0.0031 | IPR006652 |
| SMART | SM00612 | kelc_smart | 119 | 167 | 0.0037 | IPR006652 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 5 | 52 | 8.782121 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G44130.1 | Galactose oxidase/kelch repeat superfamily protein. | 0 |
| RefSeq | XP_010693831.1 | F-box/kelch-repeat protein At2g44130 [Beta vulgaris subsp. vulgaris] | 0 |
| O80582 | F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2 | 0 | |
| TrEMBL | A0A7J7CNT5 | Galactose oxidase/kelch repeat superfamily protein OS=Tripterygium wilfordii OX=458696 GN=HS088_TW15G01226 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology