Basic Information
Locus ID:
Seu_jg23053
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 55971574 | 55972023 | + | Seu_jg23053 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.93 | 16,285.86 Da | 63.03 | 45.70 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 2 | 72 | 1.06E-6 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 1 | 72 | 8.8E-6 | IPR013083 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 14 | 60 | 9.405901 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 81 | 136 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 118 | 134 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg17090 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg23053 |