Basic Information
Locus ID:
Seu_jg22962
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 54144557 | 54146331 | - | Seu_jg22962 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 34,160.59 Da | 54.92 | 84.75 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01657 | Salt stress response/antifungal | 156 | 225 | 1.0E-7 | IPR002902 |
| Pfam | PF01657 | Salt stress response/antifungal | 34 | 132 | 1.3E-13 | IPR002902 |
| Gene3D | G3DSA:3.30.430.20 | - | 142 | 228 | 3.0E-10 | IPR038408 |
| Gene3D | G3DSA:3.30.430.20 | - | 31 | 134 | 6.6E-17 | IPR038408 |
| ProSiteProfiles | PS51473 | Gnk2-homologous domain profile. | 29 | 135 | 15.312078 | IPR002902 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 255 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G38830.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 26. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_021723130.1 | putative cysteine-rich receptor-like protein kinase 9 [Chenopodium quinoa] | 0 |
| Q9T0J1 | Cysteine-rich receptor-like protein kinase 26 OS=Arabidopsis thaliana OX=3702 GN=CRK26 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RXH5 | glycerophosphodiester phosphodiesterase OS=Spinacia oleracea OX=3562 GN=SOVF_017630 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah013997 |
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg61233 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg22962 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.6AG0002320, CQ.Regalona.r1.6BG0002300 |