halophFGD

Basic Information

Locus ID: Seu_jg21990

Species & Taxonomic ID: Salicornia europaea & 206448

Genome Assembly:

Description: belongs to the protein kinase superfamily

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
ptg000014l	26973931	26979825	-	Seu_jg21990

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
7.07	44,256.38 Da	37.65	95.97	-0.09

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
Pfam	PF07714	Protein tyrosine and serine/threonine kinase	257	353	4.9E-6	IPR001245
SUPERFAMILY	SSF56112	Protein kinase-like (PK-like)	177	352	7.34E-22	IPR011009
Gene3D	G3DSA:3.30.420.10	-	8	153	3.1E-5	IPR036397
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	154	246	7.6E-8	-
Gene3D	G3DSA:1.10.510.10	Transferase(Phosphotransferase) domain 1	247	365	7.7E-21	-
SMART	SM00219	tyrkin_6	171	353	0.0071	IPR020635

Gene Ontology

Biological Process:

GO:0006468 (protein phosphorylation)

Molecular Function:

KEGG Pathway

KO Term:

K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])

Pathway:

ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)

Best hit

Source	Best Hit ID	Description
TAIR	AT3G58690.1	Protein kinase superfamily protein.
RefSeq	XP_021732936.1	probable serine/threonine-protein kinase PBL7 isoform X2 [Chenopodium quinoa]
Swiss-Prot	Q8RWW0	Receptor-like serine/threonine-protein kinase ALE2 OS=Arabidopsis thaliana OX=3702 GN=ALE2 PE=1 SV=1
TrEMBL	A0A803M6I2	Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

No orthogroup found for Seu_jg21990.