Basic Information
Locus ID:
Seu_jg21278
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
LRR-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 13741541 | 13746746 | + | Seu_jg21278 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.14 | 64,392.10 Da | 39.52 | 93.95 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 15 | 53 | 6.7E-5 | IPR001810 |
| SUPERFAMILY | SSF52058 | L domain-like | 153 | 358 | 2.14E-9 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 5 | 70 | 1.57E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 54 | 1.3E-5 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 82 | 371 | 2.3E-12 | IPR032675 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 13 | 63 | 9.444481 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G54820.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021841574.1 | F-box/FBD/LRR-repeat protein At1g78750-like isoform X2 [Spinacia oleracea] | 0 |
| Q9SJ32 | Putative F-box/FBD/LRR-repeat protein At2g05300 OS=Arabidopsis thaliana OX=3702 GN=At2g05300 PE=5 SV=2 | 0 | |
| TrEMBL | A0A0K9RXB9 | F-box domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_018110 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology