Basic Information
Locus ID:
Seu_jg21273
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 13662741 | 13665773 | + | Seu_jg21273 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.51 | 59,593.17 Da | 40.65 | 97.80 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 28 | 65 | 6.9E-7 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 24 | 81 | 1.96E-12 | IPR036047 |
| SUPERFAMILY | SSF52047 | RNI-like | 117 | 330 | 6.28E-14 | - |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 65 | 1.2E-6 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 66 | 400 | 8.0E-11 | IPR032675 |
| SMART | SM00256 | fbox_2 | 31 | 71 | 2.9E-4 | IPR001810 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 20 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G78750.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_021749865.1 | F-box/FBD/LRR-repeat protein At1g51370-like [Chenopodium quinoa] | 0 |
| Q9FLA1 | Putative F-box/FBD/LRR-repeat protein At5g44960 OS=Arabidopsis thaliana OX=3702 GN=At5g44960 PE=4 SV=2 | 0 | |
| TrEMBL | A0A7J9EP29 | F-box domain-containing protein OS=Gossypium trilobum OX=34281 GN=Gotri_009973 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology