HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Seu_jg21183
Species & Taxonomic ID: Salicornia europaea & 206448
Genome Assembly:
Description: Inactive serine threonine-protein kinase At1g67470-like
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000014l 12510680 12512383 + Seu_jg21183
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.64 22,097.29 Da 36.43 86.39 -0.30
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
KEGG Pathway
KO Term:
K04733 (interleukin-1 receptor-associated kinase 4 [EC:2.7.11.1])
Pathway:
ko04010 (MAPK signaling pathway) map04010 (MAPK signaling pathway) map04064 (NF-kappa B signaling pathway) map04620 (Toll-like receptor signaling pathway) map04621 (NOD-like receptor signaling pathway) ko04624 (Toll and Imd signaling pathway) map04624 (Toll and Imd signaling pathway)
Best hit
Source Best Hit ID Description E-value
RefSeq XP_010689929.1 non-functional pseudokinase ZED1 isoform X1 [Beta vulgaris subsp. vulgaris] 0
TrEMBL A0A0K9QT54 Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_149600 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Atriplex hortensis 5 Ah007088, Ah011556, Ah031728, Ah031729, Ah031730
Amaranthaceae Beta vulgaris 3 BVRB_6g142290, BVRB_9g210510, BVRB_9g210520
Amaranthaceae Salicornia bigelovii 6 Sbi_jg11963, Sbi_jg19328, Sbi_jg19329, Sbi_jg19330 ...
Sbi_jg43889, Sbi_jg46895
Amaranthaceae Salicornia europaea 4 Seu_jg18034, Seu_jg18035, Seu_jg21182, Seu_jg21183
Amaranthaceae Suaeda glauca 12 Sgl54870, Sgl65478, Sgl65485, Sgl65499, Sgl65503, Sgl69828 ...
Sgl69838, Sgl69842, Sgl69956, Sgl69957, Sgl80366, Sgl82828
Amaranthaceae Chenopodium album 9 gene:ENSEOMG00000016917, gene:ENSEOMG00000018381 ...
gene:ENSEOMG00000018988, gene:ENSEOMG00000049020, gene:ENSEOMG00000049372, gene:ENSEOMG00000051141, gene:ENSEOMG00000051313, gene:ENSEOMG00000051838, gene:ENSEOMG00000052266
Amaranthaceae Chenopodium quinoa 5 CQ.Regalona.r1.2AG0000600, CQ.Regalona.r1.2BG0001960 ...
CQ.Regalona.r1.9AG0010160, CQ.Regalona.r1.9AG0010170, CQ.Regalona.r1.9BG0012290
Anacardiaceae Pistacia vera 4 pistato.v30083920, pistato.v30084020, pistato.v30186420 ...
pistato.v30213430
Brassicaceae Arabidopsis thaliana 8 AT3G52530.1, AT3G57700.1, AT3G57710.1, AT3G57720.1 ...
AT3G57730.1, AT3G57740.1, AT3G57750.1, AT3G57770.1
Brassicaceae Eutrema salsugineum 10 Thhalv10000211m.g.v1.0, Thhalv10006056m.g.v1.0 ...
Thhalv10006070m.g.v1.0, Thhalv10006071m.g.v1.0, Thhalv10006089m.g.v1.0, Thhalv10006091m.g.v1.0, Thhalv10006097m.g.v1.0, Thhalv10006099m.g.v1.0, Thhalv10006391m.g.v1.0, Thhalv10006481m.g.v1.0
Brassicaceae Schrenkiella parvula 4 Sp3g24520.v2.2, Sp5g04920.v2.2, Sp5g04930.v2.2 ...
Sp6g08210.v2.2
Brassicaceae Brassica nigra 32 BniB02g036190.2N, BniB03g025360.2N, BniB05g018230.2N ...
BniB05g058470.2N, BniB05g074590.2N, BniB06g001150.2N, BniB06g001410.2N, BniB06g049460.2N, BniB06g055490.2N, BniB06g055510.2N, BniB06g055520.2N, BniB06g055530.2N, BniB06g055550.2N, BniB06g063790.2N, BniB06g063800.2N, BniB06g063810.2N, BniB06g063820.2N, BniB06g063830.2N, BniB06g066000.2N, BniB08g015940.2N, BniB08g035220.2N, BniB08g040070.2N, BniB08g066680.2N, BniB08g072460.2N, BniB08g072470.2N, BniB08g072480.2N, BniB08g072490.2N, BniB08g072500.2N, BniB08g072510.2N, BniB08g072520.2N, BniB08g072530.2N, BniB08g072540.2N
Casuarinaceae Casuarina equisetifolia 3 Ceq06G0281, Ceq06G0404, Ceq06G0405
Casuarinaceae Casuarina glauca 2 Cgl06G0419, Cgl06G0420
Portulacaceae Portulaca oleracea 3 evm.TU.LG04.1372, evm.TU.LG05.1895, evm.TU.LG10.866
Rhizophoraceae Bruguiera sexangula 4 evm.TU.Scaffold_10_RagTag.1248, evm.TU.Scaffold_1_RagTag.397 ...
evm.TU.Scaffold_1_RagTag.398, evm.TU.Scaffold_2_RagTag.1852
Rhizophoraceae Carallia pectinifolia 4 nbisL1-mrna-1836, nbisL1-mrna-7787, nbisL1-mrna-7789 ...
nbisL1-mrna-7791
Rhizophoraceae Ceriops tagal 4 nbisL1-mrna-13821, nbisL1-mrna-13822, nbisL1-mrna-16095 ...
nbisL1-mrna-9956
Rhizophoraceae Ceriops zippeliana 2 nbisL1-mrna-13855, nbisL1-mrna-5431
Rhizophoraceae Kandelia candel 2 add.evm.TU.utg000004l.146, add.evm.TU.utg000012l.91
Rhizophoraceae Kandelia obovata 1 Maker00010947
Rhizophoraceae Rhizophora apiculata 4 nbisL1-mrna-20136, nbisL1-mrna-20137, nbisL1-mrna-21932 ...
nbisL1-mrna-23401
Rhizophoraceae Rhizophora mangle 2 nbisL1-mrna-18028, nbisL1-mrna-546
Salicaceae Populus euphratica 3 populus_peu33164, populus_peu33177, populus_peu38451
Solanaceae Lycium barbarum 3 gene-LOC132610019, gene-LOC132610370, gene-LOC132610523
Solanaceae Solanum chilense 3 SOLCI003675800, SOLCI003675900, SOLCI004975100
Solanaceae Solanum pennellii 2 gene-LOC107021246, gene-LOC114077545
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.