Basic Information
Locus ID:
Seu_jg20938
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 9040015 | 9053596 | + | Seu_jg20938 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.47 | 68,370.99 Da | 48.61 | 75.18 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 511 | 552 | 2.01E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 109 | 331 | 3.04E-7 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 505 | 560 | 1.1E-11 | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 416 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 583 | 608 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 481 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 357 | 506 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 368 | 401 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 466 | 480 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 445 | 465 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_021776134.1 | uncharacterized protein LOC110739961 isoform X1 [Chenopodium quinoa] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A0K9RUR0 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_026500 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology