HalophFGD

  • Home
  • Species
  • Search
  • Tools
    • Blast
    • GO enrichment
    • KEGG enrichment
    • Genome browser
    • Sequence extract
    • Network
    • Motif Enrichment
    • Motif Scan
    • Primer Design
  • Download
  • Manual
  • Contact
Basic Information
Locus ID: Seu_jg20870
Species & Taxonomic ID: Salicornia europaea & 206448
Genome Assembly:
Description: F-box kelch-repeat protein
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000014l 8311169 8311639 + Seu_jg20870
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
9.39 18,259.94 Da 29.32 106.15 -0.20
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07734 F-box associated 6 78 6.4E-6 IPR006527
Best hit
Source Best Hit ID Description E-value
RefSeq XP_021734161.1 F-box/kelch-repeat protein At3g23880-like [Chenopodium quinoa] 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Aizoaceae Mesembryanthemum crystallinum 7 gene_13562, gene_18928, gene_18929, gene_19416, gene_4730 ...
gene_4731, gene_4732
Amaranthaceae Atriplex hortensis 7 Ah000401, Ah001137, Ah001139, Ah014368, Ah028400, Ah028402 ...
Ah029411
Amaranthaceae Salicornia bigelovii 2 Sbi_jg30749, Sbi_jg58515
Amaranthaceae Salicornia europaea 5 Seu_jg20870, Seu_jg28387, Seu_jg28388, Seu_jg28403 ...
Seu_jg28405
Amaranthaceae Chenopodium album 1 gene:ENSEOMG00000010129
Amaranthaceae Chenopodium quinoa 2 CQ.Regalona.r1.5BG0023560, CQ.Regalona.r1.8BG0020740
Portulacaceae Portulaca oleracea 2 evm.TU.LG02.1040, evm.TU.LG09.933
Solanaceae Lycium barbarum 1 gene-LOC132644015
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.