Basic Information
Locus ID:
Seu_jg20737
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
IAA15
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 6740516 | 6742675 | + | Seu_jg20737 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.75 | 22,226.13 Da | 45.33 | 69.39 | -0.65 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 87 | 189 | 1.8E-48 | IPR033389 |
| Pfam | PF02309 | AUX/IAA family | 28 | 86 | 9.4E-7 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 79 | 179 | 1.37E-21 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 83 | 191 | 2.2E-40 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 88 | 180 | 22.436058 | IPR000270 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G04730.1 | indoleacetic acid-induced protein 16. early auxin-induced (IAA16) | 0 |
| RefSeq | XP_021736793.1 | auxin-responsive protein IAA1-like [Chenopodium quinoa] | 0 |
| O24407 | Auxin-responsive protein IAA16 OS=Arabidopsis thaliana OX=3702 GN=IAA16 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2R4K3J2 | Auxin-responsive protein OS=Bassia scoparia OX=83154 PE=2 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology