HalophFGD

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Basic Information
Locus ID: Seu_jg2070
Species & Taxonomic ID: Salicornia europaea & 206448
Genome Assembly:
Description:
Maps and Mapping Data
Chromosome Start End Strand ID
ptg000012l 14241573 14243057 + Seu_jg2070
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.90 55,977.39 Da 39.17 106.09 0.02
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 25 58 4.1E-5 IPR001810
SUPERFAMILY SSF81383 F-box domain 14 60 4.71E-7 IPR036047
Gene3D G3DSA:1.20.1280.50 - 11 64 4.9E-5 -
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT1G51370.1 F-box/RNI-like/FBD-like domains-containing protein. 0
RefSeq XP_021765764.1 F-box/LRR-repeat protein 13-like [Chenopodium quinoa] 0
Swiss-Prot Q6DBN6 F-box/FBD/LRR-repeat protein At1g51370 OS=Arabidopsis thaliana OX=3702 GN=At1g51370 PE=2 SV=1 0
TrEMBL A0A803LUC7 F-box domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Amaranthaceae Salicornia bigelovii 3 Sbi_jg40480, Sbi_jg50491, Sbi_jg50492
Amaranthaceae Salicornia europaea 1 Seu_jg2070
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.