Basic Information
Locus ID:
Seu_jg20309
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
SH3 domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000014l | 1935300 | 1939997 | - | Seu_jg20309 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.58 | 41,050.78 Da | 36.40 | 74.23 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 309 | 357 | 4.5E-11 | IPR001452 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 46 | 258 | 3.66E-26 | IPR027267 |
| SUPERFAMILY | SSF50044 | SH3-domain | 305 | 361 | 1.44E-15 | IPR036028 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 292 | 368 | 1.8E-15 | - |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 44 | 270 | 7.8E-13 | IPR027267 |
| SMART | SM00326 | SH3_2 | 305 | 360 | 8.5E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 302 | 361 | 19.381563 | IPR001452 |
| Coils | Coil | Coil | 243 | 263 | - | - |
| Coils | Coil | Coil | 192 | 212 | - | - |
| Coils | Coil | Coil | 148 | 175 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_010690773.1 | SH3 domain-containing protein 2 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LPD3 | SH3 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology