Basic Information
Locus ID:
Seu_jg1982
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
LRR receptor-like serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 12907905 | 12913644 | - | Seu_jg1982 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.32 | 79,575.82 Da | 46.58 | 95.62 | -0.13 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 436 | 686 | 1.1E-15 | IPR001245 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 76 | 115 | 7.1E-8 | IPR013210 |
| Pfam | PF13855 | Leucine rich repeat | 143 | 202 | 6.5E-9 | IPR001611 |
| SUPERFAMILY | SSF52058 | L domain-like | 84 | 221 | 2.53E-29 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 435 | 686 | 1.07E-30 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 74 | 253 | 2.1E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 398 | 504 | 6.9E-14 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 506 | 692 | 2.0E-25 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 422 | 691 | 13.828012 | IPR000719 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 335 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 286 | 306 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45840.2 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010686215.2 | protein MALE DISCOVERER 1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU7 | Protein MALE DISCOVERER 1 OS=Arabidopsis thaliana OX=3702 GN=MDIS1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803ME01 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology