Basic Information
Locus ID:
Seu_jg1968
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 12715083 | 12722488 | - | Seu_jg1968 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.76 | 68,009.77 Da | 44.37 | 98.53 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00560 | Leucine Rich Repeat | 121 | 140 | 0.47 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 293 | 561 | 1.4E-42 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 67 | 3.7E-8 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 272 | 564 | 8.06E-76 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 30 | 193 | 8.5E-38 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 27 | 210 | 7.1E-55 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 261 | 366 | 1.3E-34 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 367 | 573 | 1.2E-62 | - |
| SMART | SM00369 | LRR_typ_2 | 118 | 142 | 11.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 94 | 117 | 200.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 291 | 563 | 1.6E-32 | IPR000719 |
| SMART | SM00369 | LRR_typ_2 | 166 | 189 | 25.0 | IPR003591 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 291 | 566 | 36.428276 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 297 | 319 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G45780.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010686227.1 | probable LRR receptor-like serine/threonine-protein kinase At5g45780 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| C0LGU5 | Probable LRR receptor-like serine/threonine-protein kinase At5g45780 OS=Arabidopsis thaliana OX=3702 GN=At5g45780 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QJV6 | Protein kinase domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_170800 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology