Basic Information
Locus ID:
Seu_jg19477
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
acyl- acyl-carrier-protein --UDP-N-acetylglucosamine O-acyltransferase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 13617941 | 13623421 | + | Seu_jg19477 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.62 | 35,789.19 Da | 43.83 | 85.05 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd03351 | LbH_UDP-GlcNAc_AT | 36 | 320 | 4.4307E-116 | IPR010137 |
| Pfam | PF00132 | Bacterial transferase hexapeptide (six repeats) | 159 | 191 | 5.5E-7 | IPR001451 |
| Pfam | PF00132 | Bacterial transferase hexapeptide (six repeats) | 63 | 97 | 4.2E-6 | IPR001451 |
| Pfam | PF00132 | Bacterial transferase hexapeptide (six repeats) | 34 | 61 | 4.5E-4 | IPR001451 |
| Pfam | PF13720 | Udp N-acetylglucosamine O-acyltransferase; Domain 2 | 230 | 321 | 3.3E-22 | IPR029098 |
| SUPERFAMILY | SSF51161 | Trimeric LpxA-like enzymes | 31 | 243 | 2.36E-46 | IPR011004 |
| Gene3D | G3DSA:2.160.10.10 | Hexapeptide repeat proteins | 29 | 247 | 2.0E-65 | - |
| Gene3D | G3DSA:1.20.1180.10 | - | 248 | 329 | 1.6E-35 | IPR037157 |
Gene Ontology
Biological Process:
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29540.2 | bacterial transferase hexapeptide repeat-containing protein. | 0 |
| RefSeq | XP_021751201.1 | probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 [Chenopodium quinoa] | 0 |
| Q9SU91 | Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXA PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QM57 | Acetyltransf_11 domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_163590 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg15444 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_9447 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah015606 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g189900 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25266, Sbi_jg9117 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19477 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl43081, Sgl47893 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000009839, gene:ENSEOMG00000035223 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0013410, CQ.Regalona.r1.8BG0014220 |
| Anacardiaceae | Pistacia vera | 1 | pistato.v30258030 |
| Apiaceae | Apium graveolens | 1 | Ag10G01466 |
| Arecaceae | Cocos nucifera | 1 | COCNU_14G003160 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103711199 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_04.2526.V1.1 |
| Asteraceae | Flaveria trinervia | 1 | Ftri8G10639 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT4G29540.2 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10025613m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g27400.v2.2 |
| Brassicaceae | Brassica nigra | 4 | BniB03g011310.2N, BniB05g008050.2N, BniB05g008060.2N ... |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq06G0874 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno12g02930 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate09g07270 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.1216 |
| Plumbaginaceae | Limonium bicolor | 1 | Lb1G07619 |
| Poaceae | Echinochloa crus-galli | 3 | AH02.3010, BH02.3098, CH02.3425 |
| Poaceae | Eleusine coracana subsp. coracana | 2 | gene-QOZ80_1AG0031460, gene-QOZ80_1BG0081480 |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.3HG0285740.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_054980, gene-QYE76_054982 |
| Poaceae | Oryza coarctata | 2 | Oco01G020300, Oco02G019510 |
| Poaceae | Oryza sativa | 1 | LOC_Os01g52400.1 |
| Poaceae | Paspalum vaginatum | 2 | gene-BS78_03G259700, gene-BS78_K316900 |
| Poaceae | Puccinellia tenuiflora | 2 | Pt_Chr0602831, Pt_Chr0602847 |
| Poaceae | Sporobolus alterniflorus | 3 | Chr02G010960, Chr05G022680, Chr0G030860 |
| Poaceae | Thinopyrum elongatum | 1 | Tel3E01G470000 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC3AG042280, gene_TRIDC3BG048190 |
| Poaceae | Triticum aestivum | 3 | TraesCS3A02G286700.1, TraesCS3B02G320900.1 ... |
| Poaceae | Zea mays | 1 | Zm00001eb361670_P001 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-26328 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g11036 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc09g06240 |
| Rhizophoraceae | Bruguiera sexangula | 2 | evm.TU.Scaffold_4_RagTag.1848, evm.TU.Scaffold_4_RagTag.1849 |
| Rhizophoraceae | Carallia pectinifolia | 1 | nbisL1-mrna-25734 |
| Rhizophoraceae | Ceriops tagal | 1 | nbisL1-mrna-5087 |
| Rhizophoraceae | Ceriops zippeliana | 2 | nbisL1-mrna-23078, nbisL1-mrna-4633 |
| Rhizophoraceae | Kandelia candel | 1 | evm.TU.utg000008l.1049 |
| Rhizophoraceae | Kandelia obovata | 1 | Maker00000979 |
| Rhizophoraceae | Rhizophora apiculata | 1 | nbisL1-mrna-14834 |
| Rhizophoraceae | Rhizophora mangle | 1 | nbisL1-mrna-1143 |
| Salicaceae | Populus euphratica | 1 | populus_peu11938 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132636863 |
| Solanaceae | Solanum chilense | 1 | SOLCI001664700 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107005208 |
| Tamaricaceae | Reaumuria soongarica | 1 | gene_7354 |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1722 |
| Zosteraceae | Zostera marina | 1 | Zosma05g00890.v3.1 |