Basic Information
Locus ID:
Seu_jg19225
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Translocase of chloroplast 90
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000008l | 9908087 | 9911505 | - | Seu_jg19225 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.60 | 88,555.32 Da | 44.47 | 84.19 | -0.44 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 170 | 329 | 4.8E-23 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 515 | 778 | 3.2E-111 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 157 | 296 | 3.66E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 139 | 387 | 3.4E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 66 | 778 | 3.8E-206 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 167 | 398 | 28.109529 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 487 | 510 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 420 | 441 | - | - |
| Coils | Coil | Coil | 141 | 161 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_010687870.1 | translocase of chloroplast 90, chloroplastic isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QP45 | AIG1-type G domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_157510 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology