Basic Information
Locus ID:
Seu_jg18663
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
WRKY Transcription Factor
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 52627199 | 52632486 | - | Seu_jg18663 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.49 | 62,611.93 Da | 46.59 | 45.48 | -1.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03106 | WRKY DNA -binding domain | 454 | 511 | 5.5E-25 | IPR003657 |
| Pfam | PF03106 | WRKY DNA -binding domain | 269 | 324 | 4.1E-25 | IPR003657 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 445 | 513 | 8.5E-29 | IPR036576 |
| SUPERFAMILY | SSF118290 | WRKY DNA-binding domain | 267 | 327 | 3.92E-26 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 438 | 514 | 1.9E-35 | IPR036576 |
| Gene3D | G3DSA:2.20.25.80 | WRKY domain | 261 | 328 | 5.0E-28 | IPR036576 |
| SMART | SM00774 | WRKY_cls | 268 | 326 | 9.2E-36 | IPR003657 |
| SMART | SM00774 | WRKY_cls | 453 | 512 | 1.3E-38 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 448 | 513 | 37.998291 | IPR003657 |
| ProSiteProfiles | PS50811 | WRKY domain profile. | 263 | 327 | 24.294273 | IPR003657 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 393 | 411 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 385 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 36 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 371 | 438 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 318 | 337 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 113 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 112 | 132 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 50 | - | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G13960.1 | WRKY DNA-binding protein 4. Encodes WRKY DNA-binding protein 4 (WRKY4). | 0 |
| RefSeq | XP_010670218.3 | probable WRKY transcription factor 4 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9XI90 | Probable WRKY transcription factor 4 OS=Arabidopsis thaliana OX=3702 GN=WRKY4 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QGS9 | WRKY transcription factor OS=Spinacia oleracea OX=3562 GN=SOVF_180300 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology