Basic Information
Locus ID:
Seu_jg1743
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the glycosyl hydrolase 17 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 8860339 | 8871656 | + | Seu_jg1743 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.94 | 76,702.14 Da | 41.80 | 81.83 | -0.19 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07983 | X8 domain | 499 | 570 | 6.1E-19 | IPR012946 |
| Pfam | PF00332 | Glycosyl hydrolases family 17 | 189 | 481 | 4.9E-63 | IPR000490 |
| SUPERFAMILY | SSF51445 | (Trans)glycosidases | 189 | 481 | 7.61E-72 | IPR017853 |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 188 | 365 | 1.2E-54 | - |
| Gene3D | G3DSA:3.20.20.80 | Glycosidases | 366 | 487 | 6.9E-37 | - |
| Gene3D | G3DSA:1.20.58.1040 | - | 492 | 604 | 8.5E-11 | - |
| SMART | SM00768 | X8_cls | 498 | 583 | 4.2E-46 | IPR012946 |
| ProSitePatterns | PS00587 | Glycosyl hydrolases family 17 signature. | 396 | 409 | - | IPR000490 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 72 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G11820.2 | O-Glycosyl hydrolases family 17 protein. | 0 |
| RefSeq | XP_021766864.1 | glucan endo-1,3-beta-glucosidase 1-like [Chenopodium quinoa] | 0 |
| O65399 | Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3 | 0 | |
| TrEMBL | A0A803M1V2 | X8 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology