Basic Information
Locus ID:
Seu_jg17258
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 22416933 | 22445736 | + | Seu_jg17258 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.12 | 65,925.08 Da | 35.05 | 93.30 | -0.09 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 314 | 578 | 3.90224E-86 | - |
| Pfam | PF01476 | LysM domain | 163 | 191 | 0.0032 | IPR018392 |
| Pfam | PF01476 | LysM domain | 37 | 78 | 1.7E-4 | IPR018392 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 309 | 574 | 3.3E-47 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 286 | 577 | 6.74E-77 | IPR011009 |
| SUPERFAMILY | SSF54106 | LysM domain | 33 | 78 | 5.1E-6 | IPR036779 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 27 | 82 | 8.7E-9 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 378 | 1.5E-27 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 379 | 595 | 2.0E-55 | - |
| SMART | SM00257 | LysM_2 | 159 | 201 | 1.5 | IPR018392 |
| SMART | SM00257 | LysM_2 | 33 | 78 | 0.0014 | IPR018392 |
| SMART | SM00220 | serkin_6 | 308 | 581 | 4.8E-41 | IPR000719 |
| SMART | SM00257 | LysM_2 | 94 | 140 | 0.73 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 308 | 580 | 38.915863 | IPR000719 |
| ProSiteProfiles | PS51782 | LysM domain profile. | 32 | 77 | 10.540753 | IPR018392 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 423 | 435 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 314 | 335 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_019103140.1 | chitin elicitor receptor kinase 1 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology