Basic Information
Locus ID:
Seu_jg17250
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CERK1
Description:
chitin elicitor receptor kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 22253842 | 22271807 | + | Seu_jg17250 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 64,292.35 Da | 30.34 | 94.19 | -0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 312 | 579 | 7.5E-46 | IPR001245 |
| Pfam | PF01476 | LysM domain | 162 | 190 | 0.014 | IPR018392 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 291 | 581 | 3.64E-75 | IPR011009 |
| Gene3D | G3DSA:3.10.350.10 | LysM domain | 29 | 82 | 5.2E-6 | IPR036779 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 296 | 381 | 1.2E-26 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 382 | 588 | 3.8E-53 | - |
| SMART | SM00220 | serkin_6 | 311 | 582 | 1.6E-36 | IPR000719 |
| SMART | SM00257 | LysM_2 | 158 | 200 | 7.1 | IPR018392 |
| SMART | SM00257 | LysM_2 | 93 | 139 | 0.96 | IPR018392 |
| SMART | SM00257 | LysM_2 | 32 | 77 | 3.3 | IPR018392 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 311 | 582 | 38.70385 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 426 | 438 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 317 | 339 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G21630.1 | chitin elicitor receptor kinase 1. LysM receptor-like kinase. Essential in the perception and transduction of the chitin oligosaccharide elicitor. Involved in chitin-mediated plant innate immunity. Located in the plasma membrane. | 0 |
| RefSeq | XP_021763736.1 | chitin elicitor receptor kinase 1-like [Chenopodium quinoa] | 0 |
| Q6UD73 | LysM domain receptor-like kinase 3 OS=Medicago truncatula OX=3880 GN=LYK3 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LB77 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology