Basic Information
Locus ID:
Seu_jg17020
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
U-box domain-containing protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 17574585 | 17583553 | + | Seu_jg17020 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.07 | 79,522.85 Da | 52.80 | 76.11 | -0.57 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 391 | 651 | 3.09472E-86 | - |
| CDD | cd01989 | STK_N | 17 | 125 | 1.42123E-44 | - |
| Pfam | PF00069 | Protein kinase domain | 385 | 638 | 4.1E-41 | IPR000719 |
| Pfam | PF00582 | Universal stress protein family | 18 | 124 | 4.0E-7 | IPR006016 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 361 | 644 | 1.16E-69 | IPR011009 |
| SUPERFAMILY | SSF52402 | Adenine nucleotide alpha hydrolases-like | 18 | 124 | 6.45E-9 | - |
| Gene3D | G3DSA:3.40.50.620 | HUPs | 16 | 135 | 7.0E-9 | IPR014729 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 458 | 661 | 1.0E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 351 | 457 | 9.3E-24 | - |
| SMART | SM00220 | serkin_6 | 385 | 648 | 2.1E-29 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 385 | 648 | 36.400009 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 503 | 515 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 684 | 706 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 193 | 226 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 197 | 223 | - | - |
| Coils | Coil | Coil | 254 | 288 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G24370.1 | Protein kinase protein with adenine nucleotide alpha hydrolases-like domain. | 0 |
| RefSeq | XP_021744193.1 | U-box domain-containing protein 52-like [Chenopodium quinoa] | 0 |
| Q8S8S7 | U-box domain-containing protein 34 OS=Arabidopsis thaliana OX=3702 GN=PUB34 PE=3 SV=1 | 0 | |
| TrEMBL | A0A803LYV6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology