Basic Information
Locus ID:
Seu_jg16618
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
CIPK16
Description:
Non-specific serine threonine protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 11274231 | 11275571 | + | Seu_jg16618 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.67 | 51,035.91 Da | 34.21 | 85.58 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14003 | STKc_AMPK-like | 9 | 274 | 1.97909E-122 | - |
| CDD | cd12195 | CIPK_C | 304 | 408 | 9.78343E-32 | - |
| Pfam | PF00069 | Protein kinase domain | 10 | 275 | 2.2E-74 | IPR000719 |
| Pfam | PF03822 | NAF domain | 301 | 358 | 9.8E-15 | IPR004041 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 6 | 314 | 1.62E-91 | IPR011009 |
| Gene3D | G3DSA:3.30.310.80 | Kinase associated domain 1, KA1 | 299 | 419 | 5.5E-29 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 2 | 288 | 3.8E-98 | - |
| SMART | SM00220 | serkin_6 | 10 | 275 | 3.1E-103 | IPR000719 |
| ProSiteProfiles | PS50816 | NAF domain profile. | 298 | 323 | 11.655152 | IPR018451 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 10 | 275 | 51.268978 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 129 | 141 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 16 | 39 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Pathway:
ko04068 (FoxO signaling pathway)
map04068 (FoxO signaling pathway)
ko04140 (Autophagy - animal)
map04140 (Autophagy - animal)
ko04150 (mTOR signaling pathway)
map04150 (mTOR signaling pathway)
ko04151 (PI3K-Akt signaling pathway)
map04151 (PI3K-Akt signaling pathway)
ko04152 (AMPK signaling pathway)
map04152 (AMPK signaling pathway)
ko04211 (Longevity regulating pathway)
map04211 (Longevity regulating pathway)
ko04213 (Longevity regulating pathway - multiple species)
map04213 (Longevity regulating pathway - multiple species)
ko04371 (Apelin signaling pathway)
map04371 (Apelin signaling pathway)
ko04710 (Circadian rhythm)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25110.1 | CBL-interacting protein kinase 25. member of AtCIPKs | 0 |
| RefSeq | XP_010666102.1 | CBL-interacting serine/threonine-protein kinase 25 [Beta vulgaris subsp. vulgaris] | 0 |
| Q8W1D5 | CBL-interacting serine/threonine-protein kinase 25 OS=Arabidopsis thaliana OX=3702 GN=CIPK25 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RZK8 | non-specific serine/threonine protein kinase OS=Spinacia oleracea OX=3562 GN=SOVF_011390 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8188 |
| Amaranthaceae | Atriplex hortensis | 1 | Ah034861 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_2g031440 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg21049, Sbi_jg22745 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg16618 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00018262 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl62414, Sgl66963 |
| Amaranthaceae | Chenopodium album | 1 | gene:ENSEOMG00000019749 |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.1BG0023110, CQ.Regalona.r1.2AG0023840 |
| Portulacaceae | Portulaca oleracea | 1 | evm.TU.LG09.1207 |