Basic Information
Locus ID:
Seu_jg16614
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
BEST Arabidopsis thaliana protein match is
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 11162572 | 11177551 | + | Seu_jg16614 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.55 | 99,083.95 Da | 47.26 | 65.76 | -0.93 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 659 | 699 | 3.85579E-5 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 656 | 697 | 3.84E-8 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 61 | 260 | 1.55E-10 | IPR016024 |
| Gene3D | G3DSA:2.30.30.140 | - | 649 | 703 | 1.1E-13 | - |
| SMART | SM00333 | TUDOR_7 | 654 | 713 | 4.8E-4 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 769 | 810 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 747 | 767 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 595 | 617 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 811 | 841 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 332 | 370 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 304 | 654 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 708 | 917 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 474 | 587 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 848 | 871 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 394 | 419 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 255 | 287 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 902 | 917 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G31880.2 | 0 | |
| RefSeq | XP_021769435.1 | ABC transporter F family member 4-like [Chenopodium quinoa] | 0 |
| Q8GUP3 | Sister chromatid cohesion protein PDS5 homolog C OS=Arabidopsis thaliana OX=3702 GN=PDS5C PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9R3I5 | Tudor domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_111020 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology