Basic Information
Locus ID:
Seu_jg16370
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Leucine-rich repeat receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 7702270 | 7715892 | - | Seu_jg16370 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.76 | 108,931.76 Da | 35.45 | 96.24 | -0.12 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 676 | 937 | 1.78032E-90 | - |
| Pfam | PF13855 | Leucine rich repeat | 168 | 227 | 5.1E-8 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 80 | 116 | 3.0E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 673 | 933 | 2.1E-47 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 86 | 353 | 1.87E-50 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 341 | 456 | 2.21E-11 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 651 | 934 | 2.32E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 79 | 236 | 1.4E-41 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 644 | 745 | 1.9E-32 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 746 | 958 | 3.9E-56 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 237 | 337 | 1.4E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 338 | 462 | 5.9E-14 | IPR032675 |
| SMART | SM00220 | serkin_6 | 670 | 938 | 4.7E-39 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 670 | 938 | 39.071335 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 676 | 698 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 790 | 802 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_021866985.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Spinacia oleracea] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9QHR6 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_184090 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology