Basic Information
Locus ID:
Seu_jg16308
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the peptidase A1 family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 6908682 | 6910058 | + | Seu_jg16308 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.13 | 49,507.11 Da | 35.96 | 82.58 | -0.23 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 97 | 452 | 5.94426E-81 | IPR034161 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 296 | 448 | 6.1E-25 | IPR032799 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 98 | 272 | 8.6E-54 | IPR032861 |
| SUPERFAMILY | SSF50630 | Acid proteases | 93 | 452 | 1.41E-90 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 77 | 270 | 7.2E-53 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 271 | 458 | 2.5E-44 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 98 | 448 | 41.290951 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 334 | 345 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 104 | 124 | 4.6E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 334 | 345 | 4.6E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 424 | 439 | 4.6E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G33340.1 | Eukaryotic aspartyl protease family protein. Encodes a protein with aspartic protease activity (also known as aspartate-type endopeptidase activity). Overexpression of the gene was shown to lead to salicylic acid (SA)-mediated disease resistance upon exposure to the pathogen Pseudomonas syringae. Moreover, overexpression of this gene led to the upregulation of two pathogenesis-related genes PR1 and PR2. This upregulation was no longer observed in transgenic lines expressing the bacterial NahG gene encoding a hydroxylase suppressing SA accumulation. | 0 |
| RefSeq | XP_010666175.3 | aspartic proteinase CDR1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803M3T4 | Peptidase A1 domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology