Basic Information
Locus ID:
Seu_jg16305
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
serine threonine-protein kinase-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 6867883 | 6870306 | + | Seu_jg16305 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.64 | 58,896.06 Da | 46.27 | 82.29 | -0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 158 | 183 | 2.5E-5 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 402 | 454 | 6.64E-10 | IPR011009 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 29 | 271 | 3.4E-20 | IPR009091 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 397 | 459 | 6.3E-12 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 460 | 550 | 1.9E-5 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 65 | 290 | 2.2E-26 | IPR009091 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 429 | 462 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 406 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 359 | 398 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G55950.1 | CRINKLY4 related 3. | 0 |
| RefSeq | XP_010689641.2 | putative serine/threonine-protein kinase-like protein CCR3 [Beta vulgaris subsp. vulgaris] | 0 |
| Q9LY50 | Putative serine/threonine-protein kinase-like protein CCR3 OS=Arabidopsis thaliana OX=3702 GN=CCR3 PE=2 SV=1 | 0 | |
| TrEMBL | A0A0K9RL70 | Protein kinase domain-containing protein OS=Spinacia oleracea OX=3562 GN=SOVF_059380 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology