Basic Information
Locus ID:
Seu_jg1602
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 6115355 | 6136332 | - | Seu_jg1602 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.42 | 87,595.63 Da | 43.58 | 80.82 | -0.20 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 481 | 748 | 1.12412E-93 | - |
| Pfam | PF00314 | Thaumatin family | 117 | 224 | 4.1E-15 | IPR001938 |
| Pfam | PF00314 | Thaumatin family | 34 | 107 | 5.8E-11 | IPR001938 |
| Pfam | PF00069 | Protein kinase domain | 477 | 675 | 8.5E-49 | IPR000719 |
| SUPERFAMILY | SSF49870 | Osmotin, thaumatin-like protein | 29 | 225 | 1.1E-35 | IPR037176 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 459 | 771 | 9.85E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 551 | 754 | 2.7E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 436 | 550 | 1.6E-36 | - |
| Gene3D | G3DSA:2.60.110.10 | Thaumatin | 28 | 224 | 5.4E-37 | IPR037176 |
| SMART | SM00220 | serkin_6 | 475 | 754 | 1.2E-38 | IPR000719 |
| SMART | SM00205 | tha2 | 30 | 224 | 5.9E-17 | IPR001938 |
| ProSiteProfiles | PS51367 | Thaumatin family profile. | 27 | 224 | 17.450386 | IPR001938 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 475 | 754 | 39.19854 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 596 | 608 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 481 | 503 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23160.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 8. Encodes a cysteine-rich receptor-like protein kinase. | 0 |
| RefSeq | XP_048490897.1 | cysteine-rich receptor-like protein kinase 6 [Beta vulgaris subsp. vulgaris] | 0 |
| O65468 | Cysteine-rich receptor-like protein kinase 8 OS=Arabidopsis thaliana OX=3702 GN=CRK8 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803M241 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_22061 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg40868, Sbi_jg40875 |
| Amaranthaceae | Salicornia europaea | 3 | Seu_jg1602, Seu_jg1603, Seu_jg4259 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00017178 |
| Amaranthaceae | Suaeda glauca | 5 | Sgl46180, Sgl46197, Sgl50876, Sgl50880, Sgl50932 |
| Amaranthaceae | Chenopodium album | 4 | gene:ENSEOMG00000010508, gene:ENSEOMG00000031315 ... |
| Amaranthaceae | Chenopodium quinoa | 2 | CQ.Regalona.r1.8AG0002470, CQ.Regalona.r1.8BG0002450 |
| Portulacaceae | Portulaca oleracea | 4 | evm.TU.LG01.1797, evm.TU.LG18.811, evm.TU.LG20.1079 ... |