Basic Information
Locus ID:
Seu_jg15927
Species & Taxonomic ID:
Salicornia europaea & 206448
Short Name:
EBF2
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 2182749 | 2185232 | + | Seu_jg15927 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.60 | 67,921.19 Da | 45.35 | 103.28 | 0.24 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 259 | 282 | 0.73 | IPR001611 |
| Pfam | PF00646 | F-box domain | 68 | 107 | 5.9E-6 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 529 | 550 | 0.11 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 233 | 255 | 0.14 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 169 | 387 | 4.71E-26 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 335 | 596 | 3.92E-37 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 67 | 105 | 5.49E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 499 | 596 | 7.1E-19 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 155 | 246 | 1.4E-22 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 438 | 498 | 3.7E-7 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 247 | 435 | 2.1E-36 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 61 | 110 | 3.8E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 181 | 206 | 0.018 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 233 | 258 | 5.4E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 471 | 496 | 1.8 | IPR006553 |
| SMART | SM00256 | fbox_2 | 71 | 112 | 1.4E-4 | IPR001810 |
| SMART | SM00367 | LRR_CC_2 | 391 | 416 | 120.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 259 | 284 | 1.6E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 339 | 364 | 0.71 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 445 | 470 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 365 | 390 | 0.22 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 553 | 577 | 0.063 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 579 | 604 | 140.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 207 | 232 | 1.8E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 500 | 525 | 16.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 527 | 552 | 14.0 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25490.1 | EIN3-binding F box protein 1. Encodes an F-box protein involved in the ubiquitin/proteasome-dependent proteolysis of EIN3. | 0 |
| RefSeq | XP_021769345.1 | EIN3-binding F-box protein 1-like [Chenopodium quinoa] | 0 |
| Q9SKK0 | EIN3-binding F-box protein 1 OS=Arabidopsis thaliana OX=3702 GN=EBF1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A7C9ENK7 | F-box domain-containing protein OS=Opuntia streptacantha OX=393608 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology