Basic Information
Locus ID:
Seu_jg15849
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
F-box domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 1285443 | 1291853 | + | Seu_jg15849 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.30 | 67,633.41 Da | 39.88 | 101.91 | 0.02 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 11 | 47 | 1.1E-6 | IPR001810 |
| SUPERFAMILY | SSF52047 | RNI-like | 126 | 337 | 1.18E-11 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 7 | 51 | 1.57E-12 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 84 | 372 | 2.7E-11 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 49 | 7.1E-9 | - |
| ProSiteProfiles | PS50181 | F-box domain profile. | 8 | 60 | 10.027357 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G59000.1 | F-box/RNI-like superfamily protein. | 0 |
| RefSeq | XP_010693135.2 | uncharacterized protein LOC104906115 isoform X1 [Beta vulgaris subsp. vulgaris] | 0 |
| Q2V3N5 | F-box protein At3g59000 OS=Arabidopsis thaliana OX=3702 GN=At3g59000 PE=1 SV=2 | 0 | |
| TrEMBL | A0A0K9QA55 | F-box domain-containing protein (Fragment) OS=Spinacia oleracea OX=3562 GN=SOVF_207720 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology