Basic Information
Locus ID:
Seu_jg15753
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
calcineurin b-like protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000013l | 132599 | 145315 | + | Seu_jg15753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.78 | 28,720.38 Da | 52.08 | 96.73 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00051 | EFh | 149 | 218 | 1.80068E-10 | IPR002048 |
| Pfam | PF13833 | EF-hand domain pair | 90 | 135 | 0.0016 | IPR002048 |
| Pfam | PF13499 | EF-hand domain pair | 147 | 214 | 2.5E-9 | IPR002048 |
| SUPERFAMILY | SSF47473 | EF-hand | 59 | 243 | 4.25E-45 | IPR011992 |
| Gene3D | G3DSA:1.10.238.10 | - | 58 | 251 | 1.3E-68 | - |
| SMART | SM00054 | efh_1 | 193 | 221 | 0.032 | IPR002048 |
| SMART | SM00054 | efh_1 | 112 | 140 | 0.091 | IPR002048 |
| SMART | SM00054 | efh_1 | 149 | 177 | 1.5 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 145 | 180 | 11.640179 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 189 | 224 | 11.165957 | IPR002048 |
| ProSiteProfiles | PS50222 | EF-hand calcium-binding domain profile. | 108 | 143 | 12.393354 | IPR002048 |
| ProSitePatterns | PS00018 | EF-hand calcium-binding domain. | 202 | 214 | - | IPR018247 |
| PRINTS | PR00450 | Recoverin family signature | 163 | 181 | 6.6E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 116 | 137 | 6.6E-9 | - |
| PRINTS | PR00450 | Recoverin family signature | 209 | 229 | 6.6E-9 | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Pathway:
ko04010 (MAPK signaling pathway)
map04010 (MAPK signaling pathway)
ko04020 (Calcium signaling pathway)
map04020 (Calcium signaling pathway)
ko04022 (cGMP-PKG signaling pathway)
map04022 (cGMP-PKG signaling pathway)
ko04114 (Oocyte meiosis)
map04114 (Oocyte meiosis)
ko04218 (Cellular senescence)
map04218 (Cellular senescence)
ko04310 (Wnt signaling pathway)
map04310 (Wnt signaling pathway)
ko04370 (VEGF signaling pathway)
map04370 (VEGF signaling pathway)
map04650 (Natural killer cell mediated cytotoxicity)
map04658 (Th1 and Th2 cell differentiation)
map04659 (Th17 cell differentiation)
map04660 (T cell receptor signaling pathway)
map04662 (B cell receptor signaling pathway)
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33000.2 | calcineurin B-like protein 10. Encodes a member of the calcineurin B-like calcium sensor gene family. Mediates salt tolerance by regulating ion homeostasis in Arabidopsis. In the shoot SCABP recruits the protein kinase SOS2 to the plasma membrane. SCABP is partially redundant with SOS3 but neither protein can fully complement the loss of the other protein. | 0 |
| RefSeq | XP_021749594.1 | calcineurin B-like protein 10 [Chenopodium quinoa] | 0 |
| Q7FRS8 | Calcineurin B-like protein 10 OS=Arabidopsis thaliana OX=3702 GN=CBL10 PE=1 SV=1 | 0 | |
| TrEMBL | A0A0K9RVK8 | Calcineurin B-like protein OS=Spinacia oleracea OX=3562 GN=SOVF_024020 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology