Basic Information
Locus ID:
Seu_jg1515
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 4189717 | 4190204 | + | Seu_jg1515 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 14,414.22 Da | 71.16 | 94.42 | -0.27 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 56 | 1.1E-7 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 122 | 1.96E-15 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 115 | 2.4E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 110 | 8.640834 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23140.1 | cysteine-rich RLK (RECEPTOR-like protein kinase) 6. Arabidopsis thaliana receptor-like protein kinase. Naming convention from Chen et al 2003 (PMID 14756307) | 0 |
| RefSeq | XP_021726241.1 | cysteine-rich receptor-like protein kinase 6 [Chenopodium quinoa] | 0 |
| Q9C5S9 | Cysteine-rich receptor-like protein kinase 6 OS=Arabidopsis thaliana OX=3702 GN=CRK6 PE=1 SV=1 | 0 | |
| TrEMBL | A0A803LKU6 | Protein kinase domain-containing protein OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg41028, Sbi_jg41034 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1515 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl46062 |
| Amaranthaceae | Chenopodium album | 2 | gene:ENSEOMG00000045815, gene:ENSEOMG00000047275 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8BG0002840 |