Basic Information
Locus ID:
Seu_jg15082
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000019l | 1357354 | 1376318 | + | Seu_jg15082 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.08 | 303,738.53 Da | 54.28 | 87.22 | -0.56 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 257 | 588 | 1.7E-107 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 251 | 622 | 9.74E-118 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 246 | 600 | 2.8E-135 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 249 | 596 | 6.7E-162 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 251 | 588 | 119.186386 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 484 | 495 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 452 | 469 | 2.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 538 | 559 | 2.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 485 | 503 | 2.1E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 323 | 344 | 2.1E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 62 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 63 | 86 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 47 | 88 | - | - |
| Coils | Coil | Coil | 1408 | 1442 | - | - |
| Coils | Coil | Coil | 2133 | 2174 | - | - |
| Coils | Coil | Coil | 1592 | 1619 | - | - |
| Coils | Coil | Coil | 848 | 882 | - | - |
| Coils | Coil | Coil | 2266 | 2300 | - | - |
| Coils | Coil | Coil | 1894 | 1914 | - | - |
| Coils | Coil | Coil | 1747 | 1767 | - | - |
| Coils | Coil | Coil | 1338 | 1365 | - | - |
| Coils | Coil | Coil | 2070 | 2090 | - | - |
| Coils | Coil | Coil | 1227 | 1254 | - | - |
| Coils | Coil | Coil | 1782 | 1809 | - | - |
| Coils | Coil | Coil | 1137 | 1171 | - | - |
| Coils | Coil | Coil | 976 | 996 | - | - |
| Coils | Coil | Coil | 2196 | 2258 | - | - |
| Coils | Coil | Coil | 2470 | 2553 | - | - |
| Coils | Coil | Coil | 602 | 622 | - | - |
| Coils | Coil | Coil | 2616 | 2636 | - | - |
| Coils | Coil | Coil | 2021 | 2041 | - | - |
| Coils | Coil | Coil | 677 | 711 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_021731704.1 | kinesin-like protein KIN-12F [Chenopodium quinoa] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A803LE15 | Kinesin motor domain-containing protein OS=Chenopodium quinoa OX=63459 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology