Basic Information
Locus ID:
Seu_jg1487
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Cysteine-rich receptor-like protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 3592753 | 3593994 | + | Seu_jg1487 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 31,262.38 Da | 43.26 | 89.56 | -0.30 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 6 | 177 | 2.7E-37 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 3 | 244 | 5.4E-64 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 60 | 250 | 2.9E-49 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 1 | 58 | 2.7E-23 | - |
| SMART | SM00220 | serkin_6 | 1 | 227 | 3.9E-12 | IPR000719 |
| PIRSF | PIRSF000654 | ILK | 4 | 189 | 4.0E-29 | - |
| PIRSF | PIRSF000654 | ILK | 202 | 247 | 0.16 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 272 | 31.029089 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 104 | 116 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 248 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 234 | 272 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 250 | 272 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G23240.2 | - | 0 |
| RefSeq | XP_021746898.1 | cysteine-rich receptor-like protein kinase 25 [Chenopodium quinoa] | 0 |
| O23082 | Cysteine-rich receptor-like protein kinase 44 OS=Arabidopsis thaliana OX=3702 GN=CRK44 PE=3 SV=2 | 0 | |
| TrEMBL | A0A803N951 | Cysteine-rich receptor-like protein kinase 25 OS=Chenopodium quinoa OX=63459 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Atriplex hortensis | 1 | Ah017687 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg49776, Sbi_jg49781 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg1487 |