Basic Information
Locus ID:
Seu_jg1454
Species & Taxonomic ID:
Salicornia europaea & 206448
Description:
Belongs to the TPP enzyme family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| ptg000012l | 2963973 | 2970444 | + | Seu_jg1454 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 59,192.83 Da | 23.86 | 85.58 | -0.04 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd02005 | TPP_PDC_IPDC | 348 | 531 | 3.32802E-87 | - |
| CDD | cd07038 | TPP_PYR_PDC_IPDC_like | 22 | 148 | 2.32817E-71 | - |
| Pfam | PF00205 | Thiamine pyrophosphate enzyme, central domain | 183 | 298 | 9.9E-22 | IPR012000 |
| Pfam | PF02776 | Thiamine pyrophosphate enzyme, N-terminal TPP binding domain | 22 | 152 | 4.5E-24 | IPR012001 |
| Pfam | PF02775 | Thiamine pyrophosphate enzyme, C-terminal TPP binding domain | 394 | 519 | 8.2E-16 | IPR011766 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 348 | 543 | 2.68E-42 | IPR029061 |
| SUPERFAMILY | SSF52518 | Thiamin diphosphate-binding fold (THDP-binding) | 22 | 161 | 1.74E-31 | IPR029061 |
| SUPERFAMILY | SSF52467 | DHS-like NAD/FAD-binding domain | 178 | 324 | 1.75E-33 | IPR029035 |
| Gene3D | G3DSA:3.40.50.970 | - | 342 | 530 | 1.5E-55 | - |
| Gene3D | G3DSA:3.40.50.970 | - | 11 | 158 | 1.1E-46 | - |
| Gene3D | G3DSA:3.40.50.1220 | - | 173 | 335 | 5.0E-43 | - |
| PIRSF | PIRSF036565 | Pyruvt_ip_decrb | 19 | 543 | 1.2E-189 | IPR012110 |
Gene Ontology
KEGG Pathway
Pathway:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33070.1 | Thiamine pyrophosphate dependent pyruvate decarboxylase family protein. | 0 |
| RefSeq | XP_021749331.1 | pyruvate decarboxylase 1 [Chenopodium quinoa] | 0 |
| P51850 | Pyruvate decarboxylase 1 OS=Pisum sativum OX=3888 GN=PDC1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A5D2Z8W1 | pyruvate decarboxylase OS=Gossypium mustelinum OX=34275 GN=E1A91_A05G167100v1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology